WormBase Tree Display for Variation: WBVar00188286
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WBVar00188286 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00188286 | |||
Other_name | haw55562 | ||||
haw152084 | |||||
cewivar00205367 | |||||
W02C12.3d.2:c.-1+1820A>T | |||||
W02C12.3i.1:c.27+1820A>T | |||||
W02C12.3j.1:c.27+1820A>T | |||||
HGVSg | CHROMOSOME_IV:g.4032938T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F35F11 | |
Flanking_sequences | tgtgtagatcattttgttagtgaac | agtttctaatatctattttaaattt | |||
Mapping_target | F35F11 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00571949 | |||
Status | Live | ||||
Affects | Gene | WBGene00020930 | |||
Transcript | W02C12.3j.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W02C12.3j.1:c.27+1820A>T | ||||
Intron_number | 1/9 | ||||
W02C12.3i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W02C12.3i.1:c.27+1820A>T | ||||
Intron_number | 1/10 | ||||
W02C12.3d.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W02C12.3d.2:c.-1+1820A>T | ||||
Intron_number | 1/11 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw55562 | ||||
Method | WGS_Hawaiian_Waterston |