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WormBase Tree Display for Variation: WBVar00188281

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Name Class

WBVar00188281NamePublic_nameWBVar00188281
Other_namehaw55557
cewivar00205360
W02C12.3i.1:c.28-3543T>A
W02C12.3j.1:c.28-3543T>A
W02C12.3d.2:c.1-3543T>A
HGVSgCHROMOSOME_IV:g.4030606A>T
Sequence_detailsSMapS_parentSequenceF35F11
Flanking_sequencesgaaaagaaggataagctcttcaaaagagaggaactaaaatcatcatcgtc
Mapping_targetF35F11
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00020930
TranscriptW02C12.3j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3j.1:c.28-3543T>A
Intron_number1/9
W02C12.3i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3i.1:c.28-3543T>A
Intron_number1/10
W02C12.3d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3d.2:c.1-3543T>A
Intron_number1/11
Remark[20081124 db] this Variation was previously named hw55557
MethodWGS_Hawaiian_Waterston