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WormBase Tree Display for Variation: WBVar00188266

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Name Class

WBVar00188266EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00188266
Other_namehaw55542
W02C12.3i.1:c.213+1447C>A
W02C12.3d.1:c.186+1447C>A
W02C12.3j.1:c.213+1447C>A
W02C12.3e.1:c.186+1447C>A
W02C12.3c.1:c.366+1447C>A
W02C12.3d.2:c.186+1447C>A
W02C12.3b.1:c.366+1447C>A
HGVSgCHROMOSOME_IV:g.4025431G>T
Sequence_detailsSMapS_parentSequenceF35F11
Flanking_sequencesaaatttcaatttttttttgtaagattttttttttccaaaaagcttccaga
Mapping_targetF35F11
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Andersen
LaboratoryRW
QX
PersonWBPerson1562
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
WGS_Andersen
HistoryAcquires_mergeWBVar01451992
StatusLive
AffectsGeneWBGene00020930
TranscriptW02C12.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3e.1:c.186+1447C>A
Intron_number1/9
W02C12.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3d.1:c.186+1447C>A
Intron_number1/10
W02C12.3j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3j.1:c.213+1447C>A
Intron_number2/9
W02C12.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3b.1:c.366+1447C>A
Intron_number3/11
W02C12.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3c.1:c.366+1447C>A
Intron_number3/12
W02C12.3i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3i.1:c.213+1447C>A
Intron_number2/10
W02C12.3d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3d.2:c.186+1447C>A
Intron_number2/11
ReferenceWBPaper00040707
Remark[20081124 db] this Variation was previously named hw55542
MethodWGS_Hawaiian_Waterston