WormBase Tree Display for Variation: WBVar00188266
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WBVar00188266 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00188266 | |||
Other_name | haw55542 | ||||
W02C12.3i.1:c.213+1447C>A | |||||
W02C12.3d.1:c.186+1447C>A | |||||
W02C12.3j.1:c.213+1447C>A | |||||
W02C12.3e.1:c.186+1447C>A | |||||
W02C12.3c.1:c.366+1447C>A | |||||
W02C12.3d.2:c.186+1447C>A | |||||
W02C12.3b.1:c.366+1447C>A | |||||
HGVSg | CHROMOSOME_IV:g.4025431G>T | ||||
Sequence_details | SMap | S_parent | Sequence | F35F11 | |
Flanking_sequences | aaatttcaatttttttttgtaagat | tttttttttccaaaaagcttccaga | |||
Mapping_target | F35F11 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Andersen | |||||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01451992 | |||
Status | Live | ||||
Affects | Gene | WBGene00020930 | |||
Transcript | W02C12.3e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W02C12.3e.1:c.186+1447C>A | ||||
Intron_number | 1/9 | ||||
W02C12.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W02C12.3d.1:c.186+1447C>A | ||||
Intron_number | 1/10 | ||||
W02C12.3j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W02C12.3j.1:c.213+1447C>A | ||||
Intron_number | 2/9 | ||||
W02C12.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W02C12.3b.1:c.366+1447C>A | ||||
Intron_number | 3/11 | ||||
W02C12.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W02C12.3c.1:c.366+1447C>A | ||||
Intron_number | 3/12 | ||||
W02C12.3i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W02C12.3i.1:c.213+1447C>A | ||||
Intron_number | 2/10 | ||||
W02C12.3d.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W02C12.3d.2:c.186+1447C>A | ||||
Intron_number | 2/11 | ||||
Reference | WBPaper00040707 | ||||
Remark | [20081124 db] this Variation was previously named hw55542 | ||||
Method | WGS_Hawaiian_Waterston |