WormBase Tree Display for Variation: WBVar00187805
expand all nodes | collapse all nodes | view schema
WBVar00187805 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00187805 | |||
Other_name | haw55081 | ||||
haw151743 | |||||
cewivar00204587 | |||||
Y37E11AM.3c.1:c.397-235G>A | |||||
Y37E11AM.3b.1:c.700-235G>A | |||||
HGVSg | CHROMOSOME_IV:g.3716871C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y37E11AM | |
Flanking_sequences | aaataggaaattaccaataaatttt | ctgaaaaatttcgaaaaatcggaaa | |||
Mapping_target | Y37E11AM | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00571608 | |||
Status | Live | ||||
Affects | Gene | WBGene00021367 | |||
Transcript | Y37E11AM.3c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y37E11AM.3c.1:c.397-235G>A | ||||
Intron_number | 1/1 | ||||
Y37E11AM.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y37E11AM.3b.1:c.700-235G>A | ||||
Intron_number | 2/3 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw55081 | ||||
Method | WGS_Hawaiian_Waterston |