WormBase Tree Display for Variation: WBVar00186996
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| WBVar00186996 | Name | Public_name | WBVar00186996 | ||
|---|---|---|---|---|---|
| Other_name | haw54272 | ||||
| oicr_ce1279 | |||||
| oicr_ce1280 | |||||
| oicr_ce1278 | |||||
| cewivar00203989 | |||||
| CE49036:p.Leu153= | |||||
| CE48905:p.Leu46= | |||||
| T26C12.3b.1:c.136C>T | |||||
| T26C12.3a.1:c.457C>T | |||||
| HGVSg | CHROMOSOME_IV:g.3270172G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | T26C12 | |
| Flanking_sequences | cgaaaagttctcatatttcgcagca | atgatccaaagcaagattgggtact | |||
| Mapping_target | T26C12 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006629 | From_analysis | WGS_Stein | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | WGS_Stein | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027649 | From_analysis | WGS_Stein | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Stein | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00602861 | |||
| WBVar00602860 | |||||
| WBVar00602859 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020833 | |||
| Transcript | T26C12.3b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | T26C12.3b.1:c.136C>T | ||||
| HGVSp | CE48905:p.Leu46= | ||||
| cDNA_position | 136 | ||||
| CDS_position | 136 | ||||
| Protein_position | 46 | ||||
| Exon_number | 1/2 | ||||
| Codon_change | Ctg/Ttg | ||||
| Amino_acid_change | L | ||||
| T26C12.3a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | T26C12.3a.1:c.457C>T | ||||
| HGVSp | CE49036:p.Leu153= | ||||
| cDNA_position | 458 | ||||
| CDS_position | 457 | ||||
| Protein_position | 153 | ||||
| Exon_number | 3/5 | ||||
| Codon_change | Ctg/Ttg | ||||
| Amino_acid_change | L | ||||
| Remark | [20081124 db] this Variation was previously named hw54272 | ||||
| Method | WGS_Hawaiian_Waterston |
