WormBase Tree Display for Variation: WBVar00186512
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WBVar00186512 | Name | Public_name | WBVar00186512 | ||
---|---|---|---|---|---|
Other_name | snp_Y54G2A[22] | ||||
haw53788 | |||||
haw150750 | |||||
cewivar00203527 | |||||
Y54G2A.16b.1:c.72+1406T>A | |||||
HGVSg | CHROMOSOME_IV:g.2863366A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | |
Flanking_sequences | ccaaagttcgaaaaatctggatttt | gggcttctggagctgggaaatatat | |||
Mapping_target | Y54G2A | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (58) | |||||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar00247634 | |||
WBVar01451494 | |||||
WBVar00570615 | |||||
Status | Live | ||||
Affects | Gene | WBGene00021881 | |||
Transcript | Y54G2A.16b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.16b.1:c.72+1406T>A | ||||
Intron_number | 1/5 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00040707 | |||||
WBPaper00004703 | |||||
Remark | [20081124 db] this Variation was previously named hw53788 | ||||
Method | WGS_Hawaiian_Waterston |