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WormBase Tree Display for Variation: WBVar00186512

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Name Class

WBVar00186512NamePublic_nameWBVar00186512
Other_namesnp_Y54G2A[22]
haw53788
haw150750
cewivar00203527
Y54G2A.16b.1:c.72+1406T>A
HGVSgCHROMOSOME_IV:g.2863366A>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesccaaagttcgaaaaatctggattttgggcttctggagctgggaaatatat
Mapping_targetY54G2A
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (58)
LaboratoryRW
QX
PersonWBPerson1562
WBPerson4037
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
SNP_Wicks
WGS_Andersen
HistoryAcquires_mergeWBVar00247634
WBVar01451494
WBVar00570615
StatusLive
AffectsGeneWBGene00021881
TranscriptY54G2A.16b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.16b.1:c.72+1406T>A
Intron_number1/5
ReferenceWBPaper00038208
WBPaper00040707
WBPaper00004703
Remark[20081124 db] this Variation was previously named hw53788
MethodWGS_Hawaiian_Waterston