WormBase Tree Display for Variation: WBVar00185480
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WBVar00185480 | Name | Public_name | WBVar00185480 | ||
---|---|---|---|---|---|
Other_name | haw52756 | ||||
cewivar00202634 | |||||
Y38F2AR.5a.1:c.1708-1425G>T | |||||
Y38F2AR.5b.1:c.1708-1425G>T | |||||
HGVSg | CHROMOSOME_IV:g.2363309G>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y38F2AR | |
Flanking_sequences | tgctaaaatttggtttttttttttt | gaaaaaatcgagtatttcctcccag | |||
Mapping_target | Y38F2AR | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00305708 | |||
WBGene00021423 | |||||
Transcript | Y38F2AR.5a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y38F2AR.5a.1:c.1708-1425G>T | ||||
Intron_number | 12/21 | ||||
Y38F2AR.5b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y38F2AR.5b.1:c.1708-1425G>T | ||||
Intron_number | 12/17 | ||||
Y38F2AR.26 | |||||
Remark | [20081124 db] this Variation was previously named hw52756 | ||||
Method | WGS_Hawaiian_Waterston |