WormBase Tree Display for Variation: WBVar00184744

WBVar00184744 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00184744
    Other_name: haw52020
      haw149516
      cewivar00033204
      F52C12.1a.1:c.540-177C>T
      F52C12.1b.1:c.141-177C>T
    HGVSg: CHROMOSOME_IV:g.1961466C>T
  Sequence_details: SMap: S_parent: Sequence: Y48A5A
    Flanking_sequences: actgaaaccattcaaaacaaccatt aattttcttgtggcaagtgtgctct
    Mapping_target: Y48A5A
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (16)
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00569381
    Status: Live
  Affects: Gene: WBGene00018678
    Transcript: F52C12.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F52C12.1b.1:c.141-177C>T
        Intron_number: 1/3
      F52C12.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F52C12.1a.1:c.540-177C>T
        Intron_number: 4/7
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw52020
  Method: WGS_Hawaiian_Waterston