WormBase Tree Display for Variation: WBVar00184718
expand all nodes | collapse all nodes | view schema
| WBVar00184718 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00184718 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_IV:g.1945694G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F52C12 | |
| Flanking_sequences | tcaagcgaatttgagctagagctct | aaaatatagttttaaatgtgaacaa | |||
| Mapping_target | F52C12 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00569362 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00018681 | |||
| Transcript | F52C12.4d.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F52C12.4d.1:c.4119-137G>A | ||||
| Intron_number | 20/21 | ||||
| F52C12.4h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F52C12.4h.1:c.4113-137G>A | ||||
| Intron_number | 20/21 | ||||
| F52C12.4g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F52C12.4g.1:c.4107-137G>A | ||||
| Intron_number | 21/23 | ||||
| F52C12.4c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F52C12.4c.1:c.4113-137G>A | ||||
| Intron_number | 20/21 | ||||
| F52C12.4f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F52C12.4f.1:c.4074-137G>A | ||||
| Intron_number | 19/20 | ||||
| F52C12.4b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F52C12.4b.1:c.4080-137G>A | ||||
| Intron_number | 20/22 | ||||
| F52C12.4a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F52C12.4a.1:c.4074-137G>A | ||||
| Intron_number | 19/21 | ||||
| F52C12.4e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F52C12.4e.1:c.4068-137G>A | ||||
| Intron_number | 20/22 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw51994 | ||||
| Method | WGS_Hawaiian_Waterston |
