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WormBase Tree Display for Variation: WBVar00184714

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Name Class

WBVar00184714NamePublic_nameWBVar00184714
Other_namehaw51990
cewivar00033152
F52C12.4f.1:c.3895-308C>A
F52C12.4d.1:c.3940-308C>A
F52C12.4b.1:c.3901-308C>A
F52C12.4c.1:c.3934-308C>A
F52C12.4a.1:c.3895-308C>A
F52C12.4e.1:c.3889-308C>A
F52C12.4h.1:c.3934-308C>A
F52C12.4g.1:c.3928-308C>A
HGVSgCHROMOSOME_IV:g.1944458C>A
Sequence_detailsSMapS_parentSequenceF52C12
Flanking_sequencesagatagaaaatgaggtttcacactgaattctcagcttttgaaaccatttt
Mapping_targetF52C12
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (17)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00018681
TranscriptF52C12.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4d.1:c.3940-308C>A
Intron_number19/21
F52C12.4h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4h.1:c.3934-308C>A
Intron_number19/21
F52C12.4g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4g.1:c.3928-308C>A
Intron_number20/23
F52C12.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4c.1:c.3934-308C>A
Intron_number19/21
F52C12.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4f.1:c.3895-308C>A
Intron_number18/20
F52C12.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4b.1:c.3901-308C>A
Intron_number19/22
F52C12.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4a.1:c.3895-308C>A
Intron_number18/21
F52C12.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4e.1:c.3889-308C>A
Intron_number19/22
Remark[20081124 db] this Variation was previously named hw51990
MethodWGS_Hawaiian_Waterston