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WormBase Tree Display for Variation: WBVar00184593

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Name Class

WBVar00184593EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00184593
Other_namehaw51869
haw149406
cewivar00032897
F55A8.2e.1:c.46-2882A>G
F55A8.2b.1:c.28-2882A>G
F55A8.2a.2:c.157-2882A>G
F55A8.2h.1:c.157-2882A>G
F55A8.2a.1:c.157-2882A>G
HGVSgCHROMOSOME_IV:g.1857954A>G
Sequence_detailsSMapS_parentSequenceF55A8
Flanking_sequencesaccaacacacccggcagaagaagaaaagcacgtgatttcgtgtctctctc
Mapping_targetF55A8
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (17)
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00569271
StatusLive
AffectsGeneWBGene00001173
TranscriptF55A8.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF55A8.2b.1:c.28-2882A>G
Intron_number1/9
F55A8.2e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF55A8.2e.1:c.46-2882A>G
Intron_number2/11
F55A8.2h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF55A8.2h.1:c.157-2882A>G
Intron_number1/10
F55A8.2a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF55A8.2a.2:c.157-2882A>G
Intron_number1/11
F55A8.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF55A8.2a.1:c.157-2882A>G
Intron_number1/10
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw51869
MethodWGS_Hawaiian_Waterston