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WormBase Tree Display for Variation: WBVar00184543

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Name Class

WBVar00184543NamePublic_nameWBVar00184543
Other_namehaw51819
cewivar00543890
Y38C1BA.2b.1:c.201-2343A>G
Y38C1BA.2a.3:c.-20+250A>G
Y38C1BA.2a.2:c.-19-2343A>G
Y38C1BA.2a.1:c.-19-2343A>G
HGVSgCHROMOSOME_IV:g.1810855T>C
Sequence_detailsSMapS_parentSequenceY38C1BA
Flanking_sequencesgaaatatttttaatttcatttttttctcaaaattaaaatatctcaaacga
Mapping_targetY38C1BA
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WBStrain00022887From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004913
TranscriptY38C1BA.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY38C1BA.2a.1:c.-19-2343A>G
Intron_number2/8
Y38C1BA.2a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY38C1BA.2a.3:c.-20+250A>G
Intron_number1/7
Y38C1BA.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY38C1BA.2b.1:c.201-2343A>G
Intron_number3/7
Y38C1BA.2a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY38C1BA.2a.2:c.-19-2343A>G
Intron_number1/7
Remark[20081124 db] this Variation was previously named hw51819
MethodWGS_Hawaiian_Waterston