WormBase Tree Display for Variation: WBVar00183332
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WBVar00183332 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00183332 | |||
Other_name | haw50608 | ||||
haw148537 | |||||
cewivar00030767 | |||||
Y55F3AM.21a.1:c.-290T>G | |||||
Y55F3AM.21a.2:c.-423T>G | |||||
HGVSg | CHROMOSOME_IV:g.1051061A>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y55F3AM | |
Flanking_sequences | gaacaaaacatacgtcaatcattct | aacgagtcgcttccagttgtggtgt | |||
Mapping_target | Y55F3AM | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (21) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00568402 | |||
Status | Live | ||||
Affects | Gene | WBGene00219399 | |||
Transcript | Y55F3AM.21a.2 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3AM.21a.2:c.-423T>G | ||||
cDNA_position | 206 | ||||
Exon_number | 2/9 | ||||
Y55F3AM.21a.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3AM.21a.1:c.-290T>G | ||||
cDNA_position | 228 | ||||
Exon_number | 2/8 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw50608 | ||||
Method | WGS_Hawaiian_Waterston |