WormBase Tree Display for Variation: WBVar00183265
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| WBVar00183265 | Name | Public_name | WBVar00183265 | ||
|---|---|---|---|---|---|
| Other_name | haw50541 | ||||
| cewivar00030643 | |||||
| Y55F3AM.3c.3:c.1209+518A>G | |||||
| Y55F3AM.3a.1:c.1644+518A>G | |||||
| Y55F3AM.3c.2:c.1209+518A>G | |||||
| Y55F3AM.3c.1:c.1209+518A>G | |||||
| Y55F3AM.3c.4:c.1209+518A>G | |||||
| HGVSg | CHROMOSOME_IV:g.1018240A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y55F3AM | |
| Flanking_sequences | actcaaaaattttcaatttttcagg | ttatggaggattttatgatcaaaaa | |||
| Mapping_target | Y55F3AM | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021921 | |||
| Transcript | Y55F3AM.3c.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y55F3AM.3c.2:c.1209+518A>G | ||||
| Intron_number | 5/6 | ||||
| Y55F3AM.3c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y55F3AM.3c.1:c.1209+518A>G | ||||
| Intron_number | 8/9 | ||||
| Y55F3AM.3c.4 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y55F3AM.3c.4:c.1209+518A>G | ||||
| Intron_number | 6/7 | ||||
| Y55F3AM.3c.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y55F3AM.3c.3:c.1209+518A>G | ||||
| Intron_number | 6/7 | ||||
| Y55F3AM.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y55F3AM.3a.1:c.1644+518A>G | ||||
| Intron_number | 7/8 | ||||
| Remark | [20081124 db] this Variation was previously named hw50541 | ||||
| Method | WGS_Hawaiian_Waterston |
