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WormBase Tree Display for Variation: WBVar00183164

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Name Class

WBVar00183164NamePublic_nameWBVar00183164
Other_namehaw50440
cewivar00030521
Y55F3AL.1e.1:c.2464-243T>A
Y55F3AL.1c.1:c.4210-243T>A
Y55F3AL.1b.1:c.4777-243T>A
Y55F3AL.1a.1:c.4777-243T>A
Y55F3AL.1f.1:c.2464-243T>A
Y55F3AL.1d.1:c.4210-243T>A
HGVSgCHROMOSOME_IV:g.980411T>A
Sequence_detailsSMapS_parentSequenceY55F3AM
Flanking_sequencescgatgaaacttgtcggcccctcggccatggcctagaaaccacttttcctcgtccctcgtgaggaaaagttgcagtgtttaaataaattta
Mapping_targetY55F3AM
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (16)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004047
TranscriptY55F3AL.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1e.1:c.2464-243T>A
Intron_number8/11
Y55F3AL.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1d.1:c.4210-243T>A
Intron_number17/20
Y55F3AL.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1f.1:c.2464-243T>A
Intron_number8/11
Y55F3AL.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1b.1:c.4777-243T>A
Intron_number20/24
Y55F3AL.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1a.1:c.4777-243T>A
Intron_number20/24
Y55F3AL.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1c.1:c.4210-243T>A
Intron_number17/20
Remark[20081124 db] this Variation was previously named hw50440
MethodWGS_Hawaiian_Waterston