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WormBase Tree Display for Variation: WBVar00183162

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Name Class

WBVar00183162NamePublic_nameWBVar00183162
Other_namehaw50438
cewivar00030518
Y55F3AL.1f.1:c.2110-108C>T
Y55F3AL.1b.1:c.4423-108C>T
Y55F3AL.1d.1:c.3856-108C>T
Y55F3AL.1a.1:c.4423-108C>T
Y55F3AL.1e.1:c.2110-108C>T
Y55F3AL.1c.1:c.3856-108C>T
HGVSgCHROMOSOME_IV:g.978750C>T
Sequence_detailsSMapS_parentSequenceY55F3AL
Flanking_sequencesaatacagttttttggaaaaattattatctgccagaaatttgcccaagatt
Mapping_targetY55F3AL
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (21)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004047
TranscriptY55F3AL.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1e.1:c.2110-108C>T
Intron_number7/11
Y55F3AL.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1d.1:c.3856-108C>T
Intron_number16/20
Y55F3AL.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1f.1:c.2110-108C>T
Intron_number7/11
Y55F3AL.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1b.1:c.4423-108C>T
Intron_number19/24
Y55F3AL.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1a.1:c.4423-108C>T
Intron_number19/24
Y55F3AL.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1c.1:c.3856-108C>T
Intron_number16/20
Remark[20081124 db] this Variation was previously named hw50438
MethodWGS_Hawaiian_Waterston