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WormBase Tree Display for Variation: WBVar00183154

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Name Class

WBVar00183154EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00183154
Other_namehaw50430
haw148426
cewivar00030504
Y55F3AL.1a.1:c.3176+11G>A
Y55F3AL.1c.1:c.2609+11G>A
Y55F3AL.1f.1:c.863+11G>A
Y55F3AL.1b.1:c.3176+11G>A
Y55F3AL.1d.1:c.2609+11G>A
Y55F3AL.1e.1:c.863+11G>A
HGVSgCHROMOSOME_IV:g.974652G>A
Sequence_detailsSMapS_parentSequenceY55F3AL
Flanking_sequencesttatttcgaatttacgtgagttttgtggtgaattttggattcagctcgcc
Mapping_targetY55F3AL
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (15)
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00568291
StatusLive
AffectsGeneWBGene00004047
TranscriptY55F3AL.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1e.1:c.863+11G>A
Intron_number3/11
Y55F3AL.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1d.1:c.2609+11G>A
Intron_number12/20
Y55F3AL.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1f.1:c.863+11G>A
Intron_number3/11
Y55F3AL.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1b.1:c.3176+11G>A
Intron_number15/24
Y55F3AL.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1a.1:c.3176+11G>A
Intron_number15/24
Y55F3AL.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AL.1c.1:c.2609+11G>A
Intron_number12/20
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw50430
MethodWGS_Hawaiian_Waterston