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WormBase Tree Display for Variation: WBVar00183013

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Name Class

WBVar00183013NamePublic_nameWBVar00183013
Other_namehaw50289
cewivar00200338
Y55F3BR.2b.1:c.2536+334T>G
Y55F3BR.2c.1:c.1072+334T>G
Y55F3BR.2a.1:c.3415+334T>G
HGVSgCHROMOSOME_IV:g.871019T>G
Sequence_detailsSMapS_parentSequenceY55F3BR
Flanking_sequencesttttcagatttttcaaaaatacaattttttgcaagtttacattgtcagat
Mapping_targetY55F3BR
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021939
TranscriptY55F3BR.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3BR.2c.1:c.1072+334T>G
Intron_number2/6
Y55F3BR.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3BR.2b.1:c.2536+334T>G
Intron_number11/15
Y55F3BR.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3BR.2a.1:c.3415+334T>G
Intron_number19/24
Remark[20081124 db] this Variation was previously named hw50289
MethodWGS_Hawaiian_Waterston