WormBase Tree Display for Variation: WBVar00183013
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WBVar00183013 | Name | Public_name | WBVar00183013 | ||
---|---|---|---|---|---|
Other_name | haw50289 | ||||
cewivar00200338 | |||||
Y55F3BR.2b.1:c.2536+334T>G | |||||
Y55F3BR.2c.1:c.1072+334T>G | |||||
Y55F3BR.2a.1:c.3415+334T>G | |||||
HGVSg | CHROMOSOME_IV:g.871019T>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y55F3BR | |
Flanking_sequences | ttttcagatttttcaaaaatacaat | tttttgcaagtttacattgtcagat | |||
Mapping_target | Y55F3BR | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021939 | |||
Transcript | Y55F3BR.2c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3BR.2c.1:c.1072+334T>G | ||||
Intron_number | 2/6 | ||||
Y55F3BR.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3BR.2b.1:c.2536+334T>G | ||||
Intron_number | 11/15 | ||||
Y55F3BR.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3BR.2a.1:c.3415+334T>G | ||||
Intron_number | 19/24 | ||||
Remark | [20081124 db] this Variation was previously named hw50289 | ||||
Method | WGS_Hawaiian_Waterston |