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WormBase Tree Display for Variation: WBVar00182962

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Name Class

WBVar00182962NamePublic_nameWBVar00182962
Other_namehaw50238
cewivar00200266
Y55F3BR.6a.1:c.52-190C>A
Y55F3BR.6b.1:c.271-190C>A
Y55F3BR.6a.3:c.52-190C>A
Y55F3BR.6a.2:c.52-190C>A
HGVSgCHROMOSOME_IV:g.837663G>T
Sequence_detailsSMapS_parentSequenceY55F3BR
Flanking_sequencesagaaaattatgcaaaaaaatcaattttaatgatttcttgagaaaaattgc
Mapping_targetY55F3BR
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (17)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021943
TranscriptY55F3BR.6a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3BR.6a.1:c.52-190C>A
Intron_number4/7
Y55F3BR.6a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3BR.6a.3:c.52-190C>A
Intron_number2/5
Y55F3BR.6b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3BR.6b.1:c.271-190C>A
Intron_number3/5
Y55F3BR.6a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3BR.6a.2:c.52-190C>A
Intron_number4/7
Remark[20081124 db] this Variation was previously named hw50238
MethodWGS_Hawaiian_Waterston