Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00181558

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00181558EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00181558
Other_namehaw48834
cewivar00153209
Y49E10.11b.1:c.202-241A>G
Y49E10.11a.1:c.202-241A>G
Y49E10.11a.2:c.202-241A>G
Y49E10.11c.1:c.202-241A>G
HGVSgCHROMOSOME_III:g.12419272T>C
Sequence_detailsSMapS_parentSequenceY49E10
Flanking_sequencestggagcgcgcttgcccgttattaaatcatttattttattttttgttattttccat
Mapping_targetY49E10
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00022850From_analysisWGS_De_Bono
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01337637
StatusLive
AffectsGeneWBGene00013034
TranscriptY49E10.11c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.11c.1:c.202-241A>G
Intron_number5/20
Y49E10.11b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.11b.1:c.202-241A>G
Intron_number3/15
Y49E10.11a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.11a.2:c.202-241A>G
Intron_number4/18
Y49E10.11a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.11a.1:c.202-241A>G
Intron_number5/19
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw48834
MethodWGS_Hawaiian_Waterston