WormBase Tree Display for Variation: WBVar00181545

WBVar00181545 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00181545
    Other_name: haw48821
      cewivar00111689
      Y49E10.11a.2:c.934+281C>T
      Y49E10.11a.1:c.934+281C>T
      Y49E10.11c.1:c.934+281C>T
      Y49E10.11b.1:c.934+281C>T
    HGVSg: CHROMOSOME_III:g.12415282G>A
  Sequence_details: SMap: S_parent: Sequence: Y49E10
    Flanking_sequences: aaagagcgaaaattgtggatttttt aaaagaaaatttgaaaaatttaaac
    Mapping_target: Y49E10
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (23)
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01272799
    Status: Live
  Affects: Gene: WBGene00013034
    Transcript: Y49E10.11c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y49E10.11c.1:c.934+281C>T
        Intron_number: 8/20
      Y49E10.11b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y49E10.11b.1:c.934+281C>T
        Intron_number: 6/15
      Y49E10.11a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y49E10.11a.2:c.934+281C>T
        Intron_number: 7/18
      Y49E10.11a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y49E10.11a.1:c.934+281C>T
        Intron_number: 8/19
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw48821
  Method: WGS_Hawaiian_Waterston