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WormBase Tree Display for Variation: WBVar00181524

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Name Class

WBVar00181524NamePublic_nameWBVar00181524
Other_namehaw48800
haw147283
cewivar00199157
Y49E10.11c.1:c.2417+685A>G
Y49E10.11a.2:c.2417+685A>G
Y49E10.11a.1:c.2417+685A>G
Y49E10.11b.1:c.2417+685A>G
HGVSgCHROMOSOME_III:g.12409005T>C
Sequence_detailsSMapS_parentSequenceY49E10
Flanking_sequencesaaattgtaaaaaaaattcgccgattgccggaaattttcgattccggcaatttgccgatttgccggaaattttcga
Mapping_targetY49E10
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00022850From_analysisWGS_De_Bono
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00567148
WBVar01337599
StatusLive
AffectsGeneWBGene00013034
TranscriptY49E10.11c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.11c.1:c.2417+685A>G
Intron_number12/20
Y49E10.11b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.11b.1:c.2417+685A>G
Intron_number10/15
Y49E10.11a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.11a.2:c.2417+685A>G
Intron_number11/18
Y49E10.11a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.11a.1:c.2417+685A>G
Intron_number12/19
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw48800
MethodWGS_Hawaiian_Waterston