WormBase Tree Display for Variation: WBVar00181524
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WBVar00181524 | Name | Public_name | WBVar00181524 | ||
---|---|---|---|---|---|
Other_name | haw48800 | ||||
haw147283 | |||||
cewivar00199157 | |||||
Y49E10.11c.1:c.2417+685A>G | |||||
Y49E10.11a.2:c.2417+685A>G | |||||
Y49E10.11a.1:c.2417+685A>G | |||||
Y49E10.11b.1:c.2417+685A>G | |||||
HGVSg | CHROMOSOME_III:g.12409005T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y49E10 | |
Flanking_sequences | aaattgtaaaaaaaattcgccgatt | gccggaaattttcgattccggcaatttgccgatttgccggaaattttcga | |||
Mapping_target | Y49E10 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00567148 | |||
WBVar01337599 | |||||
Status | Live | ||||
Affects | Gene | WBGene00013034 | |||
Transcript | Y49E10.11c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y49E10.11c.1:c.2417+685A>G | ||||
Intron_number | 12/20 | ||||
Y49E10.11b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y49E10.11b.1:c.2417+685A>G | ||||
Intron_number | 10/15 | ||||
Y49E10.11a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y49E10.11a.2:c.2417+685A>G | ||||
Intron_number | 11/18 | ||||
Y49E10.11a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y49E10.11a.1:c.2417+685A>G | ||||
Intron_number | 12/19 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw48800 | ||||
Method | WGS_Hawaiian_Waterston |