WormBase Tree Display for Variation: WBVar00181512

WBVar00181512 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00181512
    Other_name: pas31172
      haw48788
      cewivar00028408
      Y49E10.11a.1:c.3323-23T>A
      Y49E10.11c.1:c.*412-23T>A
      Y49E10.11a.2:c.3323-23T>A
    HGVSg: CHROMOSOME_III:g.12399483A>T
  Sequence_details: SMap: S_parent: Sequence: Y49E10
    Flanking_sequences: cgtctgaaaaaaattgggaaattta tgaattttaggccagcggtgagcgg
    Mapping_target: Y49E10
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (28)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar01337566
        WBVar00219396
        WBVar01272714
    Status: Live
  Affects: Gene: WBGene00013034
    Transcript: Y49E10.11c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y49E10.11c.1:c.*412-23T>A
        Intron_number: 20/20
      Y49E10.11a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y49E10.11a.2:c.3323-23T>A
        Intron_number: 17/18
      Y49E10.11a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y49E10.11a.1:c.3323-23T>A
        Intron_number: 18/19
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw48788
  Method: WGS_Hawaiian_Waterston