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WormBase Tree Display for Variation: WBVar00181164

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Name Class

WBVar00181164EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00181164
Other_namepas30861
haw48440
cewivar00027384
Y75B8A.16b.1:c.249T>C
Y75B8A.16c.1:c.51T>C
CE54550:p.Arg83=
CE24667:p.Arg153=
CE54552:p.Arg17=
Y75B8A.16a.1:c.459T>C
HGVSgCHROMOSOME_III:g.12220628T>C
Sequence_detailsSMapS_parentSequenceY75B8A
Flanking_sequencestcacaattgaacaagtcatctcgcggtcggagttgtcggcgtcacaatta
Mapping_targetY75B8A
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (28)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar01272088
WBVar01336818
WBVar00219085
StatusLive
AffectsGeneWBGene00013551
TranscriptY75B8A.16b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY75B8A.16b.1:c.249T>C
HGVSpCE54550:p.Arg83=
cDNA_position344
CDS_position249
Protein_position83
Exon_number3/6
Codon_changecgT/cgC
Amino_acid_changeR
Y75B8A.16c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY75B8A.16c.1:c.51T>C
HGVSpCE54552:p.Arg17=
cDNA_position240
CDS_position51
Protein_position17
Exon_number2/5
Codon_changecgT/cgC
Amino_acid_changeR
Y75B8A.16a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY75B8A.16a.1:c.459T>C
HGVSpCE24667:p.Arg153=
cDNA_position472
CDS_position459
Protein_position153
Exon_number4/7
Codon_changecgT/cgC
Amino_acid_changeR
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw48440
MethodWGS_Hawaiian_Waterston