WormBase Tree Display for Variation: WBVar00181164
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WBVar00181164 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00181164 | |||
Other_name | pas30861 | ||||
haw48440 | |||||
cewivar00027384 | |||||
Y75B8A.16b.1:c.249T>C | |||||
Y75B8A.16c.1:c.51T>C | |||||
CE54550:p.Arg83= | |||||
CE24667:p.Arg153= | |||||
CE54552:p.Arg17= | |||||
Y75B8A.16a.1:c.459T>C | |||||
HGVSg | CHROMOSOME_III:g.12220628T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y75B8A | |
Flanking_sequences | tcacaattgaacaagtcatctcgcg | gtcggagttgtcggcgtcacaatta | |||
Mapping_target | Y75B8A | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (28) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar01272088 | |||
WBVar01336818 | |||||
WBVar00219085 | |||||
Status | Live | ||||
Affects | Gene | WBGene00013551 | |||
Transcript | Y75B8A.16b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y75B8A.16b.1:c.249T>C | ||||
HGVSp | CE54550:p.Arg83= | ||||
cDNA_position | 344 | ||||
CDS_position | 249 | ||||
Protein_position | 83 | ||||
Exon_number | 3/6 | ||||
Codon_change | cgT/cgC | ||||
Amino_acid_change | R | ||||
Y75B8A.16c.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y75B8A.16c.1:c.51T>C | ||||
HGVSp | CE54552:p.Arg17= | ||||
cDNA_position | 240 | ||||
CDS_position | 51 | ||||
Protein_position | 17 | ||||
Exon_number | 2/5 | ||||
Codon_change | cgT/cgC | ||||
Amino_acid_change | R | ||||
Y75B8A.16a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y75B8A.16a.1:c.459T>C | ||||
HGVSp | CE24667:p.Arg153= | ||||
cDNA_position | 472 | ||||
CDS_position | 459 | ||||
Protein_position | 153 | ||||
Exon_number | 4/7 | ||||
Codon_change | cgT/cgC | ||||
Amino_acid_change | R | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw48440 | ||||
Method | WGS_Hawaiian_Waterston |