WormBase Tree Display for Variation: WBVar00180865
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WBVar00180865 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00180865 | |||
Other_name | haw48141 | ||||
haw146764 | |||||
cewivar00152793 | |||||
Y56A3A.32a.1:c.807+225C>A | |||||
Y56A3A.32c.1:c.153+225C>A | |||||
HGVSg | CHROMOSOME_III:g.11994774C>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y56A3A | |
Flanking_sequences | aaaaaaattattatttgaaattttt | aacaaaaaagaaaacaatttcttta | |||
Mapping_target | Y56A3A | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00566629 | |||
Status | Live | ||||
Affects | Gene | WBGene00006937 | |||
Transcript | Y56A3A.32c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y56A3A.32c.1:c.153+225C>A | ||||
Intron_number | 2/5 | ||||
Y56A3A.32a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y56A3A.32a.1:c.807+225C>A | ||||
Intron_number | 5/9 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw48141 | ||||
Method | WGS_Hawaiian_Waterston |