WormBase Tree Display for Variation: WBVar00180851
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WBVar00180851 | Name | Public_name | WBVar00180851 | ||
---|---|---|---|---|---|
Other_name | haw48127 | ||||
cewivar00026743 | |||||
Y56A3A.31b.1:c.1015+470T>A | |||||
Y56A3A.31a.2:c.982+470T>A | |||||
Y56A3A.31c.1:c.763+470T>A | |||||
Y56A3A.31a.1:c.982+470T>A | |||||
HGVSg | CHROMOSOME_III:g.11988310T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y56A3A | |
Flanking_sequences | atatctaaatttagaagaaaaaaaa | tggaaaatgttttatttccacaaaa | |||
Mapping_target | Y56A3A | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | |||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00013243 | |||
Transcript | Y56A3A.31c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y56A3A.31c.1:c.763+470T>A | ||||
Intron_number | 3/3 | ||||
Y56A3A.31b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y56A3A.31b.1:c.1015+470T>A | ||||
Intron_number | 6/6 | ||||
Y56A3A.31a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y56A3A.31a.2:c.982+470T>A | ||||
Intron_number | 5/6 | ||||
Y56A3A.31a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y56A3A.31a.1:c.982+470T>A | ||||
Intron_number | 6/7 | ||||
Remark | [20081124 db] this Variation was previously named hw48127 | ||||
Method | WGS_Hawaiian_Waterston |