WormBase Tree Display for Variation: WBVar00178679
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| WBVar00178679 | Name | Public_name | WBVar00178679 | ||
|---|---|---|---|---|---|
| Other_name | snp_D2045[1] | ||||
| haw45955 | |||||
| haw145237 | |||||
| cewivar00023696 | |||||
| D2045.5.1:c.-84T>A | |||||
| HGVSg | CHROMOSOME_III:g.10469587A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | D2045 | |
| Flanking_sequences | tcgaaatattgaaataaatttaatt | tttattcaatccttttatgtattgg | |||
| Mapping_target | D2045 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (17) | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar01267845 | |||
| WBVar00565102 | |||||
| WBVar01332883 | |||||
| WBVar00243942 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00008423 | |||
| Transcript | D2045.5.1 | VEP_consequence | 5_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | D2045.5.1:c.-84T>A | ||||
| cDNA_position | 38 | ||||
| Exon_number | 1/5 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00004703 | |||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw45955 | ||||
| Method | WGS_Hawaiian_Waterston |
