WormBase Tree Display for Variation: WBVar00178555
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WBVar00178555 | Name | Public_name | WBVar00178555 | ||
---|---|---|---|---|---|
Other_name | haw45831 | ||||
C38H2.3.1:c.*301G>A | |||||
C38H2.2.1:c.*565C>T | |||||
HGVSg | CHROMOSOME_III:g.10385326C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C38H2 | |
Flanking_sequences | TCTGTGTGTGGAATTTTTTCTTTTGAAGAAAATTTATAAAAATAAATTGG | TTTATTATTAACAAACATTGTGCACATGTGCAAGAAAAAAGAGTGAAACT | |||
Mapping_target | C38H2 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00008020 | |||
WBGene00008019 | |||||
Transcript | C38H2.3.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C38H2.3.1:c.*301G>A | ||||
cDNA_position | 695 | ||||
Exon_number | 5/5 | ||||
C38H2.2.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C38H2.2.1:c.*565C>T | ||||
cDNA_position | 1748 | ||||
Exon_number | 10/10 | ||||
Remark | [20081124 db] this Variation was previously named hw45831 | ||||
Method | WGS_Hawaiian_Waterston |