WormBase Tree Display for Variation: WBVar00178356
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WBVar00178356 | Name | Public_name | WBVar00178356 | ||
---|---|---|---|---|---|
Other_name | haw45632 | ||||
cewivar00151774 | |||||
T16H12.3b.1:c.393G>A | |||||
CE50317:p.Ala131= | |||||
T16H12.3a.1:c.393G>A | |||||
CE50218:p.Ala131= | |||||
T16H12.3c.1:c.393G>A | |||||
CE54154:p.Ala131= | |||||
HGVSg | CHROMOSOME_III:g.10082795C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T16H12 | |
Flanking_sequences | caaatcgatatagttctgcctcagt | gctgatccattgctgaaattaaaag | |||
Mapping_target | T16H12 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | |||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00011813 | |||
Transcript | T16H12.3c.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T16H12.3c.1:c.393G>A | ||||
HGVSp | CE50218:p.Ala131= | ||||
cDNA_position | 398 | ||||
CDS_position | 393 | ||||
Protein_position | 131 | ||||
Exon_number | 4/11 | ||||
Codon_change | gcG/gcA | ||||
Amino_acid_change | A | ||||
T16H12.3b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T16H12.3b.1:c.393G>A | ||||
HGVSp | CE54154:p.Ala131= | ||||
cDNA_position | 404 | ||||
CDS_position | 393 | ||||
Protein_position | 131 | ||||
Exon_number | 4/11 | ||||
Codon_change | gcG/gcA | ||||
Amino_acid_change | A | ||||
T16H12.3a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T16H12.3a.1:c.393G>A | ||||
HGVSp | CE50317:p.Ala131= | ||||
cDNA_position | 398 | ||||
CDS_position | 393 | ||||
Protein_position | 131 | ||||
Exon_number | 4/11 | ||||
Codon_change | gcG/gcA | ||||
Amino_acid_change | A | ||||
Remark | [20081124 db] this Variation was previously named hw45632 | ||||
Method | WGS_Hawaiian_Waterston |