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WormBase Tree Display for Variation: WBVar00178067

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Name Class

WBVar00178067EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00178067
Other_namepas27326
haw45343
cewivar00109056
CE00491:p.Phe486=
C48B4.1.1:c.1458C>T
HGVSgCHROMOSOME_III:g.9587737G>A
Sequence_detailsSMapS_parentSequenceC48B4
Flanking_sequencesttacacgatgacgtgcaatgtgctcaagtggctgagcatctttgcgaact
Mapping_targetC48B4
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (37)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar01267168
WBVar00215550
WBVar01332138
StatusLive
AffectsGeneWBGene00008167
TranscriptC48B4.1.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC48B4.1.1:c.1458C>T
HGVSpCE00491:p.Phe486=
cDNA_position1467
CDS_position1458
Protein_position486
Exon_number9/12
Codon_changettC/ttT
Amino_acid_changeF
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw45343
MethodWGS_Hawaiian_Waterston