WormBase Tree Display for Variation: WBVar00177870
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WBVar00177870 | Name | Public_name | WBVar00177870 | ||
---|---|---|---|---|---|
Other_name | snp_F49C5[2] | ||||
haw31120 | |||||
haw134634 | |||||
cewivar00187149 | |||||
F49C5.4.1:c.118-302G>A | |||||
HGVSg | CHROMOSOME_II:g.12539426G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F49C5 | |
Flanking_sequences | atgtgttggttttcagctaaatatt | atcttttttggtctctaggattttc | |||
Mapping_target | F49C5 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_De_Bono | |||||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
History | Acquires_merge | WBVar00244927 | |||
WBVar01379610 | |||||
WBVar00554499 | |||||
Status | Live | ||||
Affects | Gene | WBGene00009867 | |||
Transcript | F49C5.4.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F49C5.4.1:c.118-302G>A | ||||
Intron_number | 2/9 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw31120 | ||||
Method | WGS_Hawaiian_Waterston |