WormBase Tree Display for Variation: WBVar00177248
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| WBVar00177248 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00177248 | |||
| Other_name | haw30498 | ||||
| cewivar00186771 | |||||
| C50E10.11.1:c.6A>T | |||||
| CE38165:p.Ile2= | |||||
| HGVSg | CHROMOSOME_II:g.12303530A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C50E10 | |
| Flanking_sequences | tttccagaacaccttctaacatgat | ttctccgtgaacaatggtgaataca | |||
| Mapping_target | C50E10 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01378629 | |||
| WBVar01314096 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00016834 | |||
| Transcript | C50E10.11.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C50E10.11.1:c.6A>T | ||||
| HGVSp | CE38165:p.Ile2= | ||||
| cDNA_position | 6 | ||||
| CDS_position | 6 | ||||
| Protein_position | 2 | ||||
| Exon_number | 1/4 | ||||
| Codon_change | atA/atT | ||||
| Amino_acid_change | I | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw30498 | ||||
| Method | WGS_Hawaiian_Waterston |
