WormBase Tree Display for Variation: WBVar00176711
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WBVar00176711 | Name | Public_name | WBVar00176711 | ||
---|---|---|---|---|---|
Other_name | haw29961 | ||||
haw133835 | |||||
cewivar00186491 | |||||
Y17G7B.15c.1:c.31-2139T>A | |||||
Y17G7B.15a.1:c.784-2139T>A | |||||
HGVSg | CHROMOSOME_II:g.12081110A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y17G7B | |
Flanking_sequences | tttacaatttcgtttcatttttttt | aatacaattttttaatgggattttt | |||
Mapping_target | Y17G7B | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00553700 | |||
WBVar01377931 | |||||
Status | Live | ||||
Affects | Gene | WBGene00000565 | |||
Transcript | Y17G7B.15a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.15a.1:c.784-2139T>A | ||||
Intron_number | 7/13 | ||||
Y17G7B.15c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.15c.1:c.31-2139T>A | ||||
Intron_number | 1/6 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw29961 | ||||
Method | WGS_Hawaiian_Waterston |