WormBase Tree Display for Variation: WBVar00176691
expand all nodes | collapse all nodes | view schema
WBVar00176691 | Name | Public_name | WBVar00176691 | ||
---|---|---|---|---|---|
Other_name | haw29941 | ||||
haw133823 | |||||
cewivar00122437 | |||||
Y17G7B.15c.1:c.1115-315T>A | |||||
Y17G7B.15d.1:c.359-315T>A | |||||
Y17G7B.15b.1:c.1616-315T>A | |||||
Y17G7B.15a.1:c.1868-315T>A | |||||
HGVSg | CHROMOSOME_II:g.12074293A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y17G7B | |
Flanking_sequences | ttcaaacagaaaaaaggcttttttt | aatttctcctaatttttttttgttg | |||
Mapping_target | Y17G7B | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (17) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00553688 | |||
WBVar01377909 | |||||
Status | Live | ||||
Affects | Gene | WBGene00000565 | |||
Transcript | Y17G7B.15d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.15d.1:c.359-315T>A | ||||
Intron_number | 1/3 | ||||
Y17G7B.15a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.15a.1:c.1868-315T>A | ||||
Intron_number | 10/13 | ||||
Y17G7B.15c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.15c.1:c.1115-315T>A | ||||
Intron_number | 4/6 | ||||
Y17G7B.15b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.15b.1:c.1616-315T>A | ||||
Intron_number | 5/8 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw29941 | ||||
Method | WGS_Hawaiian_Waterston |