WormBase Tree Display for Variation: WBVar00176683
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WBVar00176683 | Name | Public_name | WBVar00176683 | ||
---|---|---|---|---|---|
Other_name | haw29933 | ||||
cewivar00096245 | |||||
Y17G7B.15c.1:c.1460+208T>A | |||||
Y17G7B.15d.1:c.704+208T>A | |||||
Y17G7B.15b.1:c.1961+208T>A | |||||
Y17G7B.15a.1:c.2213+208T>A | |||||
HGVSg | CHROMOSOME_II:g.12073425A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y17G7B | |
Flanking_sequences | tttcagagttaaatataattttttt | aaattaaatgtaaaaattcattaaa | |||
Mapping_target | Y17G7B | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (17) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00000565 | |||
Transcript | Y17G7B.15d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.15d.1:c.704+208T>A | ||||
Intron_number | 2/3 | ||||
Y17G7B.15a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.15a.1:c.2213+208T>A | ||||
Intron_number | 11/13 | ||||
Y17G7B.15c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.15c.1:c.1460+208T>A | ||||
Intron_number | 5/6 | ||||
Y17G7B.15b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.15b.1:c.1961+208T>A | ||||
Intron_number | 6/8 | ||||
Remark | [20081124 db] this Variation was previously named hw29933 | ||||
Method | WGS_Hawaiian_Waterston |