WormBase Tree Display for Variation: WBVar00176656
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| WBVar00176656 | Name | Public_name | WBVar00176656 | ||
|---|---|---|---|---|---|
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_II:g.12055721G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y17G7B | |
| Flanking_sequences | tggcgacattggtgagtttagaaac | agaagttttctttttaaaaaaacta | |||
| Mapping_target | Y17G7B | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (35) | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar01377876 | |||
| WBVar00230376 | |||||
| WBVar01246271 | |||||
| WBVar01313189 | |||||
| WBVar00553667 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012463 | |||
| Transcript | Y17G7B.10a.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y17G7B.10a.2:c.189+15G>A | ||||
| Intron_number | 3/8 | ||||
| Y17G7B.10a.4 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y17G7B.10a.4:c.189+15G>A | ||||
| Intron_number | 4/10 | ||||
| Y17G7B.10a.6 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y17G7B.10a.6:c.189+15G>A | ||||
| Intron_number | 2/7 | ||||
| Y17G7B.10b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y17G7B.10b.1:c.372+15G>A | ||||
| Intron_number | 4/8 | ||||
| Y17G7B.10a.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y17G7B.10a.3:c.189+15G>A | ||||
| Intron_number | 4/9 | ||||
| Y17G7B.10a.5 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y17G7B.10a.5:c.189+15G>A | ||||
| Intron_number | 3/8 | ||||
| Y17G7B.10a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y17G7B.10a.1:c.189+15G>A | ||||
| Intron_number | 4/9 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw29906 | ||||
| Method | WGS_Hawaiian_Waterston |
