WormBase Tree Display for Variation: WBVar00176622

WBVar00176622 Name: Public_name: WBVar00176622
    Other_name: pas42114
      haw29872
      haw133774
      cewivar00096145
      Y17G7B.10a.4:c.-148+665T>A
      Y17G7B.10a.2:c.-6+665T>A
      Y17G7B.10a.1:c.-148+665T>A
    HGVSg: CHROMOSOME_II:g.12050305T>A
  Sequence_details: SMap: S_parent: Sequence: Y17G7B
    Flanking_sequences: cagggaatgtgtaatattatcaaat tttttttttcaaaaatttgagcata
    Mapping_target: Y17G7B
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (29)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar00230338
        WBVar01246249
        WBVar01313170
        WBVar01377825
        WBVar00553639
    Status: Live
  Affects: Gene: WBGene00012463
    Transcript: Y17G7B.10a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y17G7B.10a.2:c.-6+665T>A
        Intron_number: 1/8
      Y17G7B.10a.4 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y17G7B.10a.4:c.-148+665T>A
        Intron_number: 1/10
      Y17G7B.10a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y17G7B.10a.1:c.-148+665T>A
        Intron_number: 1/9
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw29872
  Method: WGS_Hawaiian_Waterston