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WormBase Tree Display for Variation: WBVar00176621

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Name Class

WBVar00176621NamePublic_nameWBVar00176621
Other_namehaw29871
haw133773
cewivar00122400
Y17G7B.10a.4:c.-148+542C>A
Y17G7B.10a.1:c.-148+542C>A
Y17G7B.10a.2:c.-6+542C>A
HGVSgCHROMOSOME_II:g.12050182C>A
Sequence_detailsSMapS_parentSequenceY17G7B
Flanking_sequencestaatcatgaaaaatttgagatattaacattcataaaaagtatgggtcaaa
Mapping_targetY17G7B
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00024204From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01377824
WBVar00553638
StatusLive
AffectsGeneWBGene00012463
TranscriptY17G7B.10a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY17G7B.10a.2:c.-6+542C>A
Intron_number1/8
Y17G7B.10a.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY17G7B.10a.4:c.-148+542C>A
Intron_number1/10
Y17G7B.10a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY17G7B.10a.1:c.-148+542C>A
Intron_number1/9
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw29871
MethodWGS_Hawaiian_Waterston