WormBase Tree Display for Variation: WBVar00176412
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WBVar00176412 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00176412 | |||
Other_name | haw29662 | ||||
cewivar00095938 | |||||
W03C9.7c.1:c.1255-319T>A | |||||
W03C9.7a.2:c.1246-319T>A | |||||
W03C9.7d.1:c.430-319T>A | |||||
W03C9.7a.1:c.1246-319T>A | |||||
W03C9.7b.1:c.421-319T>A | |||||
HGVSg | CHROMOSOME_II:g.11971393T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y17G7B | |
Flanking_sequences | acgaaaaaaaatgaaaattattttt | aaaaacccgatttttttaaattttg | |||
Mapping_target | Y17G7B | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (36) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01245889 | |||
WBVar01312846 | |||||
WBVar01377559 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003228 | |||
Transcript | W03C9.7a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W03C9.7a.1:c.1246-319T>A | ||||
Intron_number | 6/7 | ||||
W03C9.7d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W03C9.7d.1:c.430-319T>A | ||||
Intron_number | 2/2 | ||||
W03C9.7c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W03C9.7c.1:c.1255-319T>A | ||||
Intron_number | 6/7 | ||||
W03C9.7a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W03C9.7a.2:c.1246-319T>A | ||||
Intron_number | 6/8 | ||||
W03C9.7b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W03C9.7b.1:c.421-319T>A | ||||
Intron_number | 2/2 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw29662 | ||||
Method | WGS_Hawaiian_Waterston |