WormBase Tree Display for Variation: WBVar00176036
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WBVar00176036 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00176036 | |||
Other_name | haw29286 | ||||
cewivar00186228 | |||||
F07A11.6e.1:c.1381-128C>A | |||||
F07A11.6b.1:c.2299-128C>A | |||||
F07A11.6a.1:c.2299-128C>A | |||||
F07A11.6f.1:c.1120-128C>A | |||||
F07A11.6c.1:c.2254-128C>A | |||||
HGVSg | CHROMOSOME_II:g.11627355G>T | ||||
Sequence_details | SMap | S_parent | Sequence | ZK20 | |
Flanking_sequences | aaaattaataggaagtcaatatgta | gaagttttcttcaatgttcaagcta | |||
Mapping_target | ZK20 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01376998 | |||
Status | Live | ||||
Affects | Gene | WBGene00008549 | |||
Transcript | F07A11.6c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F07A11.6c.1:c.2254-128C>A | ||||
Intron_number | 11/21 | ||||
F07A11.6f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F07A11.6f.1:c.1120-128C>A | ||||
Intron_number | 5/15 | ||||
F07A11.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F07A11.6b.1:c.2299-128C>A | ||||
Intron_number | 10/20 | ||||
F07A11.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F07A11.6a.1:c.2299-128C>A | ||||
Intron_number | 11/21 | ||||
F07A11.6e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F07A11.6e.1:c.1381-128C>A | ||||
Intron_number | 8/18 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw29286 | ||||
Method | WGS_Hawaiian_Waterston |