WormBase Tree Display for Variation: WBVar00175889
expand all nodes | collapse all nodes | view schema
WBVar00175889 | Name | Public_name | WBVar00175889 | ||
---|---|---|---|---|---|
Other_name | pas41385 | ||||
haw29139 | |||||
haw133228 | |||||
cewivar00095305 | |||||
W02B12.1.1:c.852G>A | |||||
CE03761:p.Thr284= | |||||
HGVSg | CHROMOSOME_II:g.11450967G>A | ||||
Sequence_details | SMap | S_parent | Sequence | W02B12 | |
Flanking_sequences | tattcgataacaaggatgatttcac | tttgtagttcaaccatttttcaacg | |||
Mapping_target | W02B12 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (37) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar01244875 | |||
WBVar00553093 | |||||
WBVar01376794 | |||||
WBVar00229609 | |||||
WBVar01311946 | |||||
Status | Live | ||||
Affects | Gene | WBGene00012201 | |||
Transcript | W02B12.1.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | W02B12.1.1:c.852G>A | ||||
HGVSp | CE03761:p.Thr284= | ||||
cDNA_position | 862 | ||||
CDS_position | 852 | ||||
Protein_position | 284 | ||||
Exon_number | 9/12 | ||||
Codon_change | acG/acA | ||||
Amino_acid_change | T | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw29139 | ||||
Method | WGS_Hawaiian_Waterston |