WormBase Tree Display for Variation: WBVar00175557
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WBVar00175557 | Name | Public_name | WBVar00175557 | ||
---|---|---|---|---|---|
Other_name | snp_C09D8[1] | ||||
haw28807 | |||||
cewivar00186033 | |||||
C09D8.1a.1:c.733+879A>T | |||||
C09D8.1f.1:c.733+879A>T | |||||
C09D8.1i.1:c.865+879A>T | |||||
C09D8.1k.1:c.733+879A>T | |||||
C09D8.1l.1:c.733+879A>T | |||||
C09D8.1j.1:c.865+879A>T | |||||
HGVSg | CHROMOSOME_II:g.10978109A>T | ||||
Sequence_details | SMap | S_parent | Sequence | C09D8 | |
Flanking_sequences | catttcaaccaaatttttaaattcg | aaaattattctatacattttgaaac | |||
Mapping_target | C09D8 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_De_Bono | |||||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
History | Acquires_merge | WBVar01376318 | |||
WBVar00243155 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004215 | |||
Transcript | C09D8.1i.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C09D8.1i.1:c.865+879A>T | ||||
Intron_number | 4/27 | ||||
C09D8.1j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C09D8.1j.1:c.865+879A>T | ||||
Intron_number | 4/28 | ||||
C09D8.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C09D8.1a.1:c.733+879A>T | ||||
Intron_number | 4/28 | ||||
C09D8.1k.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C09D8.1k.1:c.733+879A>T | ||||
Intron_number | 4/27 | ||||
C09D8.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C09D8.1f.1:c.733+879A>T | ||||
Intron_number | 4/28 | ||||
C09D8.1l.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C09D8.1l.1:c.733+879A>T | ||||
Intron_number | 4/29 | ||||
Reference | WBPaper00004703 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw28807 | ||||
Method | WGS_Hawaiian_Waterston |