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WormBase Tree Display for Variation: WBVar00175557

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Name Class

WBVar00175557NamePublic_nameWBVar00175557
Other_namesnp_C09D8[1]
haw28807
cewivar00186033
C09D8.1a.1:c.733+879A>T
C09D8.1f.1:c.733+879A>T
C09D8.1i.1:c.865+879A>T
C09D8.1k.1:c.733+879A>T
C09D8.1l.1:c.733+879A>T
C09D8.1j.1:c.865+879A>T
HGVSgCHROMOSOME_II:g.10978109A>T
Sequence_detailsSMapS_parentSequenceC09D8
Flanking_sequencescatttcaaccaaatttttaaattcgaaaattattctatacattttgaaac
Mapping_targetC09D8
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
SNP_Wicks
HistoryAcquires_mergeWBVar01376318
WBVar00243155
StatusLive
AffectsGeneWBGene00004215
TranscriptC09D8.1i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC09D8.1i.1:c.865+879A>T
Intron_number4/27
C09D8.1j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC09D8.1j.1:c.865+879A>T
Intron_number4/28
C09D8.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC09D8.1a.1:c.733+879A>T
Intron_number4/28
C09D8.1k.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC09D8.1k.1:c.733+879A>T
Intron_number4/27
C09D8.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC09D8.1f.1:c.733+879A>T
Intron_number4/28
C09D8.1l.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC09D8.1l.1:c.733+879A>T
Intron_number4/29
ReferenceWBPaper00004703
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw28807
MethodWGS_Hawaiian_Waterston