WormBase Tree Display for Variation: WBVar00175383
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WBVar00175383 | Name | Public_name | WBVar00175383 | ||
---|---|---|---|---|---|
Other_name | haw28633 | ||||
haw132852 | |||||
cewivar00121451 | |||||
C52A11.4e.1:c.1068+23A>G | |||||
C52A11.4d.1:c.1782+23A>G | |||||
C52A11.4c.1:c.1122+23A>G | |||||
C52A11.4a.1:c.1695+23A>G | |||||
C52A11.4b.1:c.1695+23A>G | |||||
C52A11.4g.1:c.1068+23A>G | |||||
C52A11.4f.1:c.1695+23A>G | |||||
HGVSg | CHROMOSOME_II:g.10758866T>C | ||||
Sequence_details | SMap | S_parent | Sequence | C52A11 | |
Flanking_sequences | ttgaaaattttgagaattttaacca | accacgctaattcaaatcttacctc | |||
Mapping_target | C52A11 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (19) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01376088 | |||
WBVar00552717 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003404 | |||
Transcript | C52A11.4b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C52A11.4b.1:c.1695+23A>G | ||||
Intron_number | 17/19 | ||||
C52A11.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C52A11.4c.1:c.1122+23A>G | ||||
Intron_number | 10/35 | ||||
C52A11.4f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C52A11.4f.1:c.1695+23A>G | ||||
Intron_number | 16/42 | ||||
C52A11.4g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C52A11.4g.1:c.1068+23A>G | ||||
Intron_number | 15/40 | ||||
C52A11.4e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C52A11.4e.1:c.1068+23A>G | ||||
Intron_number | 10/35 | ||||
C52A11.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C52A11.4d.1:c.1782+23A>G | ||||
Intron_number | 17/42 | ||||
C52A11.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C52A11.4a.1:c.1695+23A>G | ||||
Intron_number | 17/43 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw28633 | ||||
Method | WGS_Hawaiian_Waterston |