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WormBase Tree Display for Variation: WBVar00175383

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Name Class

WBVar00175383NamePublic_nameWBVar00175383
Other_namehaw28633
haw132852
cewivar00121451
C52A11.4e.1:c.1068+23A>G
C52A11.4d.1:c.1782+23A>G
C52A11.4c.1:c.1122+23A>G
C52A11.4a.1:c.1695+23A>G
C52A11.4b.1:c.1695+23A>G
C52A11.4g.1:c.1068+23A>G
C52A11.4f.1:c.1695+23A>G
HGVSgCHROMOSOME_II:g.10758866T>C
Sequence_detailsSMapS_parentSequenceC52A11
Flanking_sequencesttgaaaattttgagaattttaaccaaccacgctaattcaaatcttacctc
Mapping_targetC52A11
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (19)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01376088
WBVar00552717
StatusLive
AffectsGeneWBGene00003404
TranscriptC52A11.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52A11.4b.1:c.1695+23A>G
Intron_number17/19
C52A11.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52A11.4c.1:c.1122+23A>G
Intron_number10/35
C52A11.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52A11.4f.1:c.1695+23A>G
Intron_number16/42
C52A11.4g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52A11.4g.1:c.1068+23A>G
Intron_number15/40
C52A11.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52A11.4e.1:c.1068+23A>G
Intron_number10/35
C52A11.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52A11.4d.1:c.1782+23A>G
Intron_number17/42
C52A11.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52A11.4a.1:c.1695+23A>G
Intron_number17/43
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw28633
MethodWGS_Hawaiian_Waterston