WormBase Tree Display for Variation: WBVar00175040
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| WBVar00175040 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00175040 | |||
| Other_name | haw28290 | ||||
| cewivar00185844 | |||||
| C07E3.5.3:c.1011+21A>G | |||||
| C07E3.5.2:c.1011+21A>G | |||||
| C07E3.5.1:c.1011+21A>G | |||||
| HGVSg | CHROMOSOME_II:g.10363774T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | C07E3 | |
| Flanking_sequences | ctttgctcttaaccaagttttatat | ccgaaaaactccaaactcacatttt | |||
| Mapping_target | C07E3 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01375620 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00007416 | |||
| Transcript | C07E3.5.3 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C07E3.5.3:c.1011+21A>G | ||||
| Intron_number | 10/11 | ||||
| C07E3.5.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C07E3.5.2:c.1011+21A>G | ||||
| Intron_number | 10/11 | ||||
| C07E3.5.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C07E3.5.1:c.1011+21A>G | ||||
| Intron_number | 9/10 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw28290 | ||||
| Method | WGS_Hawaiian_Waterston |
