Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00174457

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00174457NamePublic_nameWBVar00174457
Other_namesnp_C16D2[1]
haw27707
haw132223
cewivar00185521
Y9C2UA.1a.2:c.-3+91A>T
Y9C2UA.1b.1:c.122-987A>T
Y9C2UA.1a.1:c.-2-987A>T
Y9C2UA.1c.1:c.199+91A>T
HGVSgCHROMOSOME_II:g.9141923A>T
Sequence_detailsSMapS_parentSequenceC16D2
Flanking_sequencesaaaaagttattcataattgaaattttttccgtcaacaaattctaatttaa
Mapping_targetC16D2
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
SNP_Wicks
HistoryAcquires_mergeWBVar00243288
WBVar00552088
WBVar01374843
StatusLive
AffectsGeneWBGene00012421
TranscriptY9C2UA.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY9C2UA.1a.2:c.-3+91A>T
Intron_number1/8
Y9C2UA.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY9C2UA.1a.1:c.-2-987A>T
Intron_number1/8
Y9C2UA.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY9C2UA.1b.1:c.122-987A>T
Intron_number2/7
Y9C2UA.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY9C2UA.1c.1:c.199+91A>T
Intron_number1/6
ReferenceWBPaper00038208
WBPaper00004703
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw27707
MethodWGS_Hawaiian_Waterston