WormBase Tree Display for Variation: WBVar00174389
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| WBVar00174389 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00174389 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_II:g.9066841C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | T24B8 | |
| Flanking_sequences | atatgtctttagaacaatttggcta | cacattttttaatcgtaatagtctt | |||
| Mapping_target | T24B8 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (33) | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar01374762 | |||
| WBVar01242862 | |||||
| WBVar00228079 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00011978 | |||
| Transcript | T24B8.4j.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24B8.4j.1:c.129+206G>A | ||||
| Intron_number | 1/2 | ||||
| T24B8.4f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24B8.4f.1:c.1653+206G>A | ||||
| Intron_number | 8/9 | ||||
| T24B8.4b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24B8.4b.1:c.129+206G>A | ||||
| Intron_number | 1/3 | ||||
| T24B8.4e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24B8.4e.1:c.1653+206G>A | ||||
| Intron_number | 8/10 | ||||
| T24B8.4h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24B8.4h.1:c.129+206G>A | ||||
| Intron_number | 1/3 | ||||
| T24B8.4i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24B8.4i.1:c.129+206G>A | ||||
| Intron_number | 1/2 | ||||
| T24B8.4a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24B8.4a.1:c.1653+206G>A | ||||
| Intron_number | 8/10 | ||||
| T24B8.4g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24B8.4g.1:c.1653+206G>A | ||||
| Intron_number | 8/9 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw27639 | ||||
| Method | WGS_Hawaiian_Waterston |
