WormBase Tree Display for Variation: WBVar00174242

WBVar00174242 Name: Public_name: WBVar00174242
    Other_name: pas38277
      haw27492
      haw132075
      cewivar00092875
      CE52964:p.Pro1183Ser
      CE39177:p.Pro1183Ser
      T07D4.3a.1:c.3547C>T
      T07D4.3b.1:c.3547C>T
    HGVSg: CHROMOSOME_II:g.8879523G>A
  Sequence_details: SMap: S_parent: Sequence: T07D4
    Flanking_sequences: caatcagcatattcaagacgatttg agcagggcctttctggattaactga
    Mapping_target: T07D4
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (31)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar00551940
        WBVar01242657
        WBVar00226501
        WBVar01374565
    Status: Live
  Affects: Gene: WBGene00004355
    Transcript: T07D4.3b.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: T07D4.3b.1:c.3547C>T
        HGVSp: CE52964:p.Pro1183Ser
        cDNA_position: 3547
        CDS_position: 3547
        Protein_position: 1183
        Exon_number: 13/16
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
      T07D4.3a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: T07D4.3a.1:c.3547C>T
        HGVSp: CE39177:p.Pro1183Ser
        cDNA_position: 3547
        CDS_position: 3547
        Protein_position: 1183
        Exon_number: 13/16
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw27492
  Method: WGS_Hawaiian_Waterston