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WormBase Tree Display for Variation: WBVar00173887

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Name Class

WBVar00173887EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00173887
Other_namehaw27137
K02C4.3d.1:c.3132-105A>C
K02C4.3c.1:c.3132-96A>C
K02C4.3b.1:c.3132-105A>C
K02C4.3e.1:c.207-96A>C
K02C4.3a.1:c.3132-96A>C
HGVSgCHROMOSOME_II:g.8082536T>G
Sequence_detailsSMapS_parentSequenceK02C4
Flanking_sequencestcctttttaaatatagatttttttgtttttttttcattttgtttcctcat
Mapping_targetK02C4
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
HistoryAcquires_mergeWBVar01374120
StatusLive
AffectsGeneWBGene00010502
TranscriptK02C4.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK02C4.3e.1:c.207-96A>C
Intron_number1/3
K02C4.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK02C4.3a.1:c.3132-96A>C
Intron_number8/11
K02C4.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK02C4.3b.1:c.3132-105A>C
Intron_number9/12
K02C4.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK02C4.3c.1:c.3132-96A>C
Intron_number9/12
K02C4.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK02C4.3d.1:c.3132-105A>C
Intron_number8/11
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw27137
MethodWGS_Hawaiian_Waterston