WormBase Tree Display for Variation: WBVar00173887
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WBVar00173887 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00173887 | |||
Other_name | haw27137 | ||||
K02C4.3d.1:c.3132-105A>C | |||||
K02C4.3c.1:c.3132-96A>C | |||||
K02C4.3b.1:c.3132-105A>C | |||||
K02C4.3e.1:c.207-96A>C | |||||
K02C4.3a.1:c.3132-96A>C | |||||
HGVSg | CHROMOSOME_II:g.8082536T>G | ||||
Sequence_details | SMap | S_parent | Sequence | K02C4 | |
Flanking_sequences | tcctttttaaatatagatttttttg | tttttttttcattttgtttcctcat | |||
Mapping_target | K02C4 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
History | Acquires_merge | WBVar01374120 | |||
Status | Live | ||||
Affects | Gene | WBGene00010502 | |||
Transcript | K02C4.3e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K02C4.3e.1:c.207-96A>C | ||||
Intron_number | 1/3 | ||||
K02C4.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K02C4.3a.1:c.3132-96A>C | ||||
Intron_number | 8/11 | ||||
K02C4.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K02C4.3b.1:c.3132-105A>C | ||||
Intron_number | 9/12 | ||||
K02C4.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K02C4.3c.1:c.3132-96A>C | ||||
Intron_number | 9/12 | ||||
K02C4.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K02C4.3d.1:c.3132-105A>C | ||||
Intron_number | 8/11 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw27137 | ||||
Method | WGS_Hawaiian_Waterston |