WormBase Tree Display for Variation: WBVar00173608
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| WBVar00173608 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00173608 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_II:g.7767143C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C06A8 | |
| Flanking_sequences | tacctggaaaacaataaaattgtat | gaagacgaaataaaacttttgacac | |||
| Mapping_target | C06A8 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (37) | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar00225934 | |||
| WBVar01241726 | |||||
| WBVar01308178 | |||||
| WBVar01373776 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00015517 | |||
| Transcript | C06A8.8h.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C06A8.8h.1:c.766-23G>A | ||||
| Intron_number | 7/8 | ||||
| C06A8.8g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C06A8.8g.1:c.190-23G>A | ||||
| Intron_number | 2/8 | ||||
| C06A8.8e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C06A8.8e.1:c.445-23G>A | ||||
| Intron_number | 4/9 | ||||
| C06A8.8c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C06A8.8c.1:c.445-23G>A | ||||
| Intron_number | 5/6 | ||||
| C06A8.8b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C06A8.8b.1:c.190-23G>A | ||||
| Intron_number | 3/4 | ||||
| C06A8.8d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C06A8.8d.1:c.247-23G>A | ||||
| Intron_number | 3/3 | ||||
| C06A8.8a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C06A8.8a.1:c.766-23G>A | ||||
| Intron_number | 7/13 | ||||
| C06A8.8f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C06A8.8f.1:c.247-23G>A | ||||
| Intron_number | 3/8 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw26858 | ||||
| Method | WGS_Hawaiian_Waterston |
