WormBase Tree Display for Variation: WBVar00173552
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WBVar00173552 | Name | Public_name | WBVar00173552 | ||
---|---|---|---|---|---|
Other_name | haw26802 | ||||
haw131629 | |||||
cewivar00185191 | |||||
F18A1.3d.1:c.66+2083C>G | |||||
F18A1.3c.1:c.66+2083C>G | |||||
F18A1.3b.1:c.66+2083C>G | |||||
F18A1.3l.1:c.66+2083C>G | |||||
F18A1.3i.1:c.66+2083C>G | |||||
F18A1.3a.1:c.66+2083C>G | |||||
HGVSg | CHROMOSOME_II:g.7674191C>G | ||||
Sequence_details | SMap | S_parent | Sequence | F18A1 | |
Flanking_sequences | tcacttttccgtcactacacttaac | ttaagtctgcagacttctctttttt | |||
Mapping_target | F18A1 | ||||
Type_of_mutation | Substitution | C | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (11) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01373706 | |||
WBVar00551494 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003044 | |||
Transcript | F18A1.3l.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F18A1.3l.1:c.66+2083C>G | ||||
Intron_number | 2/6 | ||||
F18A1.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F18A1.3b.1:c.66+2083C>G | ||||
Intron_number | 2/6 | ||||
F18A1.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F18A1.3a.1:c.66+2083C>G | ||||
Intron_number | 2/5 | ||||
F18A1.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F18A1.3c.1:c.66+2083C>G | ||||
Intron_number | 2/4 | ||||
F18A1.3i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F18A1.3i.1:c.66+2083C>G | ||||
Intron_number | 2/6 | ||||
F18A1.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F18A1.3d.1:c.66+2083C>G | ||||
Intron_number | 2/6 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw26802 | ||||
Method | WGS_Hawaiian_Waterston |